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The information on this site is from academic and research studies. Applicability to humans must be determined by a licensed medical professional.

Taxonomy Layers to Condition Chart

Data based on PubMed articles.

I want to see how various bacteria are assoicated with multiple conditions.


For lines going to Conditions For lines between layers -- it is the count of how many child elements are associated at each layer.

Based on these studies

  1. Increased proportions of Bifidobacterium and the Lactobacillus group and loss of butyrate-producing bacteria in inflammatory bowel disease.
    Journal of clinical microbiology (J Clin Microbiol ) Vol: 52 Issue 2 Pages: 398-406
    Pub: 2014 Feb Epub: 2013 Nov 13
    • Wang W
    • Chen L
    • Zhou R
    • Wang X
    • Song L
    • Huang S
    • Wang G
    • Xia B

  2. Cross sectional evaluation of the gut-microbiome metabolome axis in an Italian cohort of IBD patients.
    Scientific reports (Sci Rep ) Vol: 7 Issue 1 Pages: 9523
    Pub: 2017 Aug 25 Epub: 2017 Aug 25
    • Santoru ML
    • Piras C
    • Murgia A
    • Palmas V
    • Camboni T
    • Liggi S
    • Ibba I
    • Lai MA
    • Orrù S
    • Loizedda AL
    • Griffin JL
    • Usai P
    • Caboni P
    • Atzori L
    • Manzin A

  3. Modification of intestinal flora in the treatment of inflammatory bowel disease.
    Current pharmaceutical design (Curr Pharm Des ) Vol: 9 Issue 4 Pages: 333-46
    Pub: 2003 Epub:
    • Kanauchi O
    • Mitsuyama K
    • Araki Y
    • Andoh A

  4. Distinct gut microbiota profiles in patients with primary sclerosing cholangitis and ulcerative colitis.
    World journal of gastroenterology (World J Gastroenterol ) Vol: 23 Issue 25 Pages: 4548-4558
    Pub: 2017 Jul 7 Epub:
    • Bajer L
    • Kverka M
    • Kostovcik M
    • Macinga P
    • Dvorak J
    • Stehlikova Z
    • Brezina J
    • Wohl P
    • Spicak J
    • Drastich P

  5. Alterations of the human gut Methanobrevibacter smithii as a biomarker for inflammatory bowel diseases.
    Microbial pathogenesis (Microb Pathog ) Vol: 117 Issue Pages: 285-289
    Pub: 2018 Apr Epub: 2018 Feb 22
    • Ghavami SB
    • Rostami E
    • Sephay AA
    • Shahrokh S
    • Balaii H
    • Aghdaei HA
    • Zali MR