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The information on this site is from academic and research studies. Applicability to humans must be determined by a licensed medical professional.

- Actinobacteria class
**Decreases**Source: Phylum/Genus mean ± SD mean ± ...

- Christensenellaceae
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Coriobacteriaceae
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Erysipelotrichaceae
**Decreases**Source: Berberine, a major pharmacolog... - Erysipelotrichaceae
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Lachnospiraceae
**Decreases**Source: Berberine, a major pharmacolog... - Lachnospiraceae
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Peptostreptococcaceae
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Porphyromonadaceae
**Increases**Source: Berberine, a major pharmacolog... - Prevotellaceae
**Decreases**Source: Berberine, a major pharmacolog... - Prevotellaceae
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Rikenellaceae
**Decreases**Source: Berberine, a major pharmacolog... - Ruminococcaceae
**Increases**Source: Berberine, a major pharmacolog... - Ruminococcaceae
**Increases**Source: DataPunk.Net... - Ruminococcaceae
**Decreases**Source: Phylum/Genus mean ± SD mean ± ...

- Acetanaerobacterium
**Increases**Source: DataPunk.Net... - Acetivibrio
**Increases**Source: DataPunk.Net... - Akkermansia
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Allobaculum
**Increases**Source: Berberine, a major pharmacolog... - Allobaculum
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Anaerobacterium
**Increases**Source: DataPunk.Net... - Anaerofilum
**Increases**Source: DataPunk.Net... - Anaerofilum
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Anaerostipes
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Anaerotruncus
**Increases**Source: DataPunk.Net... - Anaerovibrio
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Bacillus
**Decreases**Source: One of them (Berberis Decoctum... - Bacteroides
**Increases**Source: . Sixty out of the 134 OTUs we... - Bacteroides
**Increases**Source: Berberine, a major pharmacolog... - Bacteroides
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Bifidobacterium
**Decreases**Source: Berberine, a major pharmacolog... - Bifidobacterium
**Increases**Source: Compared to their decreases in... - Bifidobacterium
**Decreases**Source: DataPunk.Net... - Bilophila
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Blautia
**Increases**Source: . Sixty out of the 134 OTUs we... - Blautia
**Increases**Source: Berberine, a major pharmacolog... - Blautia
**Increases**Source: DataPunk.Net... - Blautia
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Butyricicoccus
**Increases**Source: . Sixty out of the 134 OTUs we... - Butyricimonas
**Increases**Source: Berberine, a major pharmacolog... - Butyricimonas
**Increases**Source: DataPunk.Net... - Candidatus Soleaferrea
**Increases**Source: DataPunk.Net... - Christensenella
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Clostridium
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Collinsella
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Coprococcus
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Delftia
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Desulfovibrio
**Increases**Source: DataPunk.Net... - Desulfovibrio
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Enterococcus
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Enterococcus
**Decreases**Source: The effect of berberine hydroc... - Faecalibacterium
**Increases**Source: DataPunk.Net... - Fastidiosipila
**Increases**Source: DataPunk.Net... - Flavonifractor
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Hydrogenoanaerobacterium
**Increases**Source: DataPunk.Net... - Klebsiella
**Decreases**Source: DataPunk.Net... - Klebsiella
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Lactobacillus
**Increases**Source: Compared to their decreases in... - Lactobacillus
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Morganella
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Oscillibacter
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Oscillospira
**Increases**Source: DataPunk.Net... - Oscillospira
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Papillibacter
**Increases**Source: DataPunk.Net... - Parabacteroides
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Pasteurella
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Peptostreptococcus
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Phascolarctobacterium
**Increases**Source: . Sixty out of the 134 OTUs we... - Phascolarctobacterium
**Increases**Source: Berberine, a major pharmacolog... - Phascolarctobacterium
**Increases**Source: DataPunk.Net... - Phascolarctobacterium
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Prevotella
**Increases**Source: Berberine, a major pharmacolog... - Prevotella
**Increases**Source: DataPunk.Net... - Prevotella
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Pseudomonas
**Decreases**Source: Berberine Is a Novel Type Effl... - Pseudomonas
**Decreases**Source: DataPunk.Net... - Pseudomonas
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Robinsoniella
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Roseburia
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Ruminococcus
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Sporobacter
**Increases**Source: DataPunk.Net... - Staphylococcus
**Decreases**Source: DataPunk.Net... - Staphylococcus
**Decreases**Source: One of them (Berberis Decoctum... - Streptococcus
**Increases**Source: Antibacterial activity and mec... - Streptococcus
**Decreases**Source: DataPunk.Net... - Streptococcus
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Subdoligranulum
**Increases**Source: DataPunk.Net... - Sutterella
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Thalassospira
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Turicibacter
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Xylanibacterium
**Decreases**Source: Phylum/Genus mean ± SD mean ± ...

- Actinobacteria
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Bacteroidetes
**Increases**Source: Compared to their decreases in... - Bacteroidetes
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Cyanobacteria
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Firmicutes
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Fusobacteria
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Lentisphaerae
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Proteobacteria
**Increases**Source: Phylum/Genus mean ± SD mean ± ... - Spirochaetes
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Tenericutes
**Decreases**Source: Phylum/Genus mean ± SD mean ± ... - Verrucomicrobia
**Increases**Source: Phylum/Genus mean ± SD mean ± ...

- Bacillus subtilis
**Decreases**Source: One of them (Berberis Decoctum... - Bifidobacterium adolescentis
**Decreases**Source: DataPunk.Net... - Bifidobacterium animalis
**Decreases**Source: DataPunk.Net... - Bifidobacterium bifidum
**Decreases**Source: DataPunk.Net... - Bifidobacterium breve
**Decreases**Source: DataPunk.Net... - Bifidobacterium catenulatum
**Decreases**Source: DataPunk.Net... - Bifidobacterium choerinum
**Decreases**Source: DataPunk.Net... - Bifidobacterium kashiwanohense
**Decreases**Source: DataPunk.Net... - Bifidobacterium longum
**Decreases**Source: DataPunk.Net... - Bifidobacterium pseudocatenulatum
**Decreases**Source: DataPunk.Net... - Bifidobacterium pullorum
**Decreases**Source: DataPunk.Net... - Bifidobacterium sp.
**Decreases**Source: DataPunk.Net... - Bifidobacterium tsurumiense
**Decreases**Source: DataPunk.Net... - Blautia coccoides
**Increases**Source: DataPunk.Net... - Blautia faecis
**Increases**Source: DataPunk.Net... - Blautia glucerasea
**Increases**Source: DataPunk.Net... - Blautia hansenii
**Increases**Source: DataPunk.Net... - Blautia hydrogenotrophica
**Increases**Source: DataPunk.Net... - Blautia luti
**Increases**Source: DataPunk.Net... - Blautia producta
**Increases**Source: DataPunk.Net... - Blautia sp. Ser5
**Increases**Source: DataPunk.Net... - Blautia sp. Ser8
**Increases**Source: DataPunk.Net... - Blautia sp. YHC-4
**Increases**Source: DataPunk.Net... - Blautia stercoris
**Increases**Source: DataPunk.Net... - Blautia wexlerae
**Increases**Source: DataPunk.Net... - Butyricimonas sp. 214-4
**Increases**Source: DataPunk.Net... - Butyricimonas sp. JCM 18676
**Increases**Source: DataPunk.Net... - Butyricimonas sp. JCM 18677
**Increases**Source: DataPunk.Net... - Butyricimonas synergistica
**Increases**Source: DataPunk.Net... - Butyricimonas virosa
**Increases**Source: DataPunk.Net... - Desulfovibrio desulfuricans
**Increases**Source: DataPunk.Net... - Desulfovibrio piger
**Increases**Source: DataPunk.Net... - Desulfovibrio sp.
**Increases**Source: DataPunk.Net... - Desulfovibrio sp. 3_1_syn3
**Increases**Source: DataPunk.Net... - Desulfovibrio sp. 6_1_46AFAA
**Increases**Source: DataPunk.Net... - Enterococcus faecalis
**Decreases**Source: The effect of berberine hydroc... - Escherichia coli
**Decreases**Source: Preliminary analysis, on the b... - Klebsiella sp. B12
**Decreases**Source: DataPunk.Net... - Phascolarctobacterium faecium
**Increases**Source: DataPunk.Net... - Phascolarctobacterium sp. 377
**Increases**Source: DataPunk.Net... - Phascolarctobacterium sp. canine oral taxon 149
**Increases**Source: DataPunk.Net... - Phascolarctobacterium succinatutens
**Increases**Source: DataPunk.Net... - Prevotella bivia
**Increases**Source: DataPunk.Net... - Prevotella buccalis
**Increases**Source: DataPunk.Net... - Prevotella disiens
**Increases**Source: DataPunk.Net... - Prevotella nanceiensis
**Increases**Source: DataPunk.Net... - Prevotella nigrescens
**Increases**Source: DataPunk.Net... - Prevotella oris
**Increases**Source: DataPunk.Net... - Prevotella sp. BV3C7
**Increases**Source: DataPunk.Net... - Prevotella sp. S4-10
**Increases**Source: DataPunk.Net... - Prevotella timonensis
**Increases**Source: DataPunk.Net... - Pseudomonas aeruginosa
**Decreases**Source: Berberine Is a Novel Type Effl... - Pseudomonas aeruginosa
**Decreases**Source: DataPunk.Net... - Staphylococcus aureus
**Decreases**Source: One of them (Berberis Decoctum... - Staphylococcus sp. 3348O2
**Decreases**Source: DataPunk.Net... - Staphylococcus sp. C9I2
**Decreases**Source: DataPunk.Net... - Streptococcus agalactiae
**Increases**Source: Antibacterial activity and mec... - Streptococcus agalactiae
**Decreases**Source: DataPunk.Net... - Streptococcus australis
**Decreases**Source: DataPunk.Net... - Streptococcus gordonii
**Decreases**Source: DataPunk.Net... - Streptococcus mutans
**Decreases**Source: DataPunk.Net... - Streptococcus parasanguinis
**Decreases**Source: DataPunk.Net... - Streptococcus pasteurianus
**Decreases**Source: DataPunk.Net... - Streptococcus peroris
**Decreases**Source: DataPunk.Net... - Streptococcus sp. 11aTha1
**Decreases**Source: DataPunk.Net... - Streptococcus sp. 2011_Ileo_MS_A10
**Decreases**Source: DataPunk.Net... - Streptococcus sp. 2011_Oral_MS_A3
**Decreases**Source: DataPunk.Net... - Streptococcus sp. 3244O2
**Decreases**Source: DataPunk.Net... - Streptococcus sp. BS35a
**Decreases**Source: DataPunk.Net... - Streptococcus sp. GMD6S
**Decreases**Source: DataPunk.Net... - Streptococcus sp. oral taxon G59
**Decreases**Source: DataPunk.Net... - Streptococcus sp. S16-11
**Decreases**Source: DataPunk.Net... - Streptococcus thermophilus
**Decreases**Source: DataPunk.Net...

- Pseudomonas aeruginosa group
**Decreases**Source: DataPunk.Net... - Streptococcus dysgalactiae group
**Decreases**Source: DataPunk.Net...